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Research and analysis

NOIDs causative agents: week 43 (week ending 25 October 2026)

Updated 28 October 2026

The list of causative agents that laboratories must notify the UK Health Security Agency (UKHSA) about has been expanded to include additional notifiable organisms. These became reportable under the Health Protection (Notification) (Amendment) Regulations from 6 April 2025.

Publication of the additional causative agents will begin at a later date, once reporting development work has been undertaken to include them.

This report contains statistics of formal notifications of causative agent test results to UKHSA from diagnostic laboratories in England, under Regulation 4 of the Health Protection (Notifications) Regulations 2010.

The number of notifications in this report reflects test results provided from laboratories to UKHSA before UKHSA interprets or applies standardised case definitions to these test results. Individual test results will not always result in a confirmed diagnosis of a disease, therefore the notifications in this report should not be considered counts of cases and should be interpreted with caution.

Epidemiology reports including confirmed case numbers using standardised case definitions are published separately on a per pathogen or pathogen-group basis.

Laboratories in England have a statutory duty to notify UKHSA of the identification of the following causative agents:

  • Bacillus anthracis
  • Bacillus cereus
  • Bordetella pertussis
  • Borrelia spp
  • Brucella spp
  • Burkholderia mallei
  • Burkholderia pseudomallei
  • Campylobacter spp
  • carbapenemase-producing Gram-negative bacteria
  • Chikungunya virus
  • Chlamydophila psittaci
  • Clostridium botulinum
  • Clostridium perfringens
  • Clostridium tetani
  • Corynebacterium diphtheriae
  • Corynebacterium ulcerans
  • Coxiella burnetii
  • Crimean-Congo haemorrhagic fever virus
  • Cryptosporidium spp
  • Dengue virus
  • Ebola virus
  • Entamoeba histolytica
  • Escherichia coli O 157
  • Francisella tularensis
  • Giardia spp
  • Guanarito virus
  • Haemophilus influenzae (invasive)
  • Hanta virus
  • hepatitis A
  • hepatitis B
  • hepatitis C
  • hepatitis D
  • hepatitis E
  • influenza virus
  • Junin virus
  • Kyasanur Forest disease virus
  • Lassa virus
  • Legionella spp
  • Leptospira interrogans
  • Listeria monocytogenes
  • Machupo virus
  • Marburg virus
  • measles virus
  • mpox virus
  • mumps virus
  • Mycobacterium tuberculosis complex
  • Neisseria meningitidis
  • Omsk haemorrhagic fever virus
  • Plasmodium falciparum
  • Plasmodium Knowlesi
  • Plasmodium Malariae
  • Plasmodium Ovale
  • Plasmodium Vivax
  • polio virus
  • Rabies virus
  • Rickettsia spp
  • Rift Valley fever virus
  • Rubella virus
  • Sabia virus
  • Salmonella spp
  • SARS coronavirus
  • Shigella spp
  • Streptococcus group A (invasive)
  • Streptococcus pneumoniae (invasive)
  • Varicella zoster virus
  • Variola virus
  • Vibrio cholerae
  • West Nile virus
  • Yellow fever virus
  • Yersinia pestis

Statutory notifications of causative agents, grouped by root organism

Totals for the current week compared to the previous 5.

Week notification received 2026/38 2026/39 2026/40 2026/41 2026/42 2026/43
Arboviruses                
West Nile Virus 1 - - - - -    
Bacillus                
Bacillus cereus 47 45 44 42 40 35    
Bordetella                
Bordetella pertussis 3 5 6 4 5 2    
Borrelia                
Borrelia burgdorferi 63 48 50 42 40 35    
Borrelia other named - - - - - 1    
Borrelia sp 4 11 10 11 11 11    
Brucella                
Brucella sp - - 1 4 1 -    
Burkholderia                
Burkholderia pseudomallei - - 1 - - -    
Campylobacter                
Campylobacter coli 32 30 34 31 52 30    
Campylobacter fetus 1 - 1 - - -    
Campylobacter jejuni 296 310 273 286 280 234    
Campylobacter lari - - - - 1 -    
Campylobacter other named 1 3 2 2 3 2    
Campylobacter rectus - 1 - - - -    
Campylobacter sp 1054 1175 1199 1065 1092 1070    
Campylobacter upsaliensis - - 1 1 - -    
Campylobacter ureolyticus (bacteroides corrodens) 1 1 3 - 3 -    
Chikungunya virus                
Chikungunya virus 2 1 1 1 1 -    
Clostridium                
Clostridium perfringens 29 34 31 33 35 44    
Coronavirus                
Coronavirus 30 57 38 63 26 107    
Human coronavirus 229e - 2 - - 1 -    
Human coronavirus nl63 - - 2 1 - 2    
Human coronavirus oc43 - 1 - 2 - 1    
SARS-CoV-2 coronavirus (COVID-19) 1143 1517 2080 2204 2398 2291    
SARS-CoV-2 coronavirus (COVID-19) indeterminate 3 24 23 31 16 28    
SARS-CoV-2 IgG antibody negative - 1 - - - -    
SARS-CoV-2 IgG antibody positive 27 16 23 23 24 14    
SARS-CoV-2 total antibody positive 13 14 7 33 2 12    
Corynebacterium                
Corynebacterium diphtheriae 3 5 4 4 6 8    
Corynebacterium ulcerans - 3 - 1 1 -    
Coxiella                
Coxiella burnetii 1 - - - - -    
Cryptosporidium                
Cryptosporidium hominis 3 5 - 1 1 -    
Cryptosporidium parvum 5 13 7 4 8 12    
Cryptosporidium sp 130 100 95 87 77 91    
Entamoeba                
Entamoeba histolytica 2 3 4 1 2 2    
Escherichia                
Escherichia coli O 157 21 20 25 28 21 16    
Flaviviruses                
Dengue virus 7 8 11 5 5 5    
Giardia                
Giardia intestinalis 1 2 7 6 12 1    
Giardia sp 132 152 128 135 115 126    
Haemophilus                
Haemophilus influenzae 53 49 49 42 59 73    
Hepatitis viruses                
Hepatitis A 29 30 29 32 32 21    
Hepatitis B 247 322 283 250 266 256    
Hepatitis C 201 266 225 259 197 201    
Hepatitis D 7 8 4 7 5 9    
Hepatitis E 51 43 54 37 43 37    
Influenza virus                
Influenza A 638 862 1471 1544 1870 1986    
Influenza B 54 67 97 109 106 143    
Influenza indeterminate - 4 4 - 6 2    
Influenza ungrouped 26 44 41 29 29 32    
Legionella                
Legionella cherrii - 1 - - - -    
Legionella longbeachae - - 1 - - -    
Legionella pneumophila 14 33 20 15 7 11    
Legionella sp 9 12 10 1 2 3    
Leptospira                
Leptospira interrogans - - - - - 1    
Listeria                
Listeria monocytogenes 2 - 2 2 4 6    
Mycobacterium                
Mycobacterium tuberculosis 84 93 84 82 85 74    
Neisseria                
Neisseria meningitidis 30 16 12 18 19 29    
Orthopoxvirus                
Mpox virus positive 15 21 18 26 25 22    
Paramyxoviruses                
Measles virus 9 5 9 8 8 9    
Mumps virus 4 5 2 3 3 9    
Plasmodium                
Plasmodium falciparum - 19 - - - 5    
Plasmodium ovale - 2 - - - 1    
Plasmodium vivax - - - 1 - -    
Polyomavirus                
Polyomavirus BK 69 80 51 66 80 77    
Polyomavirus JC 10 16 10 11 10 9    
Polyomavirus untyped 22 26 12 4 21 25    
Rickettsia                
Rickettsia prowazekii - - - - - 1    
Rickettsia rickettsii - - - 1 - -    
Rickettsia sp - - - - - 1    
Rickettsia spotted fever 1 - - - - 1    
Rickettsia tsutsugamushi 1 1 1 - 1 1    
Rubella virus                
Rubella virus 5 3 5 2 2 4    
**Salmonella                
Other salmonellas 81 72 84 77 57 16    
Salmonella agona 6 5 - - - -    
Salmonella chester 7 9 5 5 - -    
Salmonella enterica 11 5 - - - -    
Salmonella enteritidis 149 150 148 85 50 20    
Salmonella infantis 10 6 6 5 - -    
Salmonella java - - - 6 - -    
Salmonella kentucky 7 - 5 - - -    
Salmonella mikawasima 6 - - - - -    
Salmonella montevideo 6 - - - - -    
Salmonella muenster - - 5 - - -    
Salmonella newport - - - 7 - -    
Salmonella oranienburg 5 - - - - -    
Salmonella saint-paul - - 5 - - -    
Salmonella sp 53 42 32 66 149 177    
Salmonella strathcona - 8 9 6 6 -    
Salmonella typhi and paratyphi 37 29 25 18 7 6    
Salmonella typhimurium 80 91 56 53 29 16    
Salmonella virchow - 5 - - - -    
Shigella                
Shigella boydii 1 2 1 - - 1    
Shigella dysenteriae - - - 1 - -    
Shigella flexneri 8 14 27 16 17 14    
Shigella sonnei 21 29 28 21 17 2    
Shigella sp 77 64 52 57 67 50    
Streptococcus                
Streptococcus group A 49 43 53 49 47 54    
Streptococcus pneumoniae 54 60 124 93 116 114    
Vibrio                
Vibrio cholerae - 3 2 2 - -    

Carbapenemase-producing Enterobacterales (CPE)

For all carbapenemase-producing Gram-negative organisms, the reports are de-duplicated by first mention of organism species and resistance mechanism by person in a rolling 52-week period.

Note: the numbers presented here do not include specimens that have been referred to the Antimicrobial Resistance and Healthcare Associated Infections (AMRHAI) Division.

Week notification received 2026/38 2026/39 2026/40 2026/41 2026/42 2026/43
Citrobacter              
Citrobacter spp IMP 1 1 - - - -
KPC 2 - - 1 - -  
NDM 2 - 1 4 - -  
OXA48 3 6 3 2 6 -  
Other 1 2 - 1 1 -  
Enterobacter              
Enterobacter cloacae complex IMP 5 1 - 3 2 1
KPC 5 5 10 4 7 -  
NDM 10 11 18 13 11 4  
OXA48 6 7 6 9 8 -  
VIM - 1 1 - 1 -  
Other 1 1 5 4 5 1  
Other enterobacter spp IMP - - - 1 - -
NDM 1 - - - - -  
Other 1 - 1 - 1 -  
Escherichia              
Escherichia coli IMP 3 1 1 1 - -
KPC 1 3 3 5 2 1  
NDM 36 28 34 21 20 8  
OXA48 37 41 41 30 28 7  
VIM - - - - 1 -  
Other 4 7 7 8 5 1  
Escherichia vulneris KPC - - - - 1 -
Other escherichia spp OXA48 1 - - - - -
Klebsiella              
Klebsiella aerogenes NDM - - - - - 1
OXA48 - 1 1 1 - 1  
VIM 1 - - - - -  
Other - - - 2 - -  
Klebsiella oxytoca IMP 1 - - - - -
KPC 3 1 - 2 - 1  
NDM 1 - 1 - 1 1  
OXA48 - - - - 2 -  
VIM - - - - 1 -  
Other - - - - 1 -  
Klebsiella pneumoniae IMP - - 1 1 1 -
KPC 12 3 7 6 7 2  
NDM 10 12 12 12 9 2  
OXA48 9 16 9 4 4 3  
VIM 1 - 1 1 3 -  
Other 5 5 3 2 5 1  
Klebsiella variicola NDM - - - - 1 -
OXA48 - 1 - 1 - -  
Other klebsiella spp IMP 1 - - - - -
KPC 1 - - - - -  
OXA48 1 - 1 - - -  
Other 1 - - - - -  
Morganella              
Morganella morganii OXA48 - - - 1 - -
Proteus              
Proteus mirabilis NDM - 1 2 4 3 -
VIM - - - - 1 -  
Other 1 - 2 1 1 -  
Raoultella              
Raoultella ornithinolytica OXA48 - 2 - - - -
Serratia              
Serratia marcescens/ureilytica NDM - 1 - - - -
OXA48 - 2 - - - -  
Other serratia spp OXA48 - 1 - - - -

Other carbapenemase-producing Gram-negative organisms

For all carbapenemase-producing Gram-negative organisms, the reports are de-duplicated by first mention of organism species and resistance mechanism by person in a rolling 52-week period.

Note: the numbers presented here do not include specimens that have been referred to.

Week notification received 2026/38 2026/39 2026/40 2026/41 2026/42 2026/43
Acinetobacter              
Acinetobacter baumannii NDM 1 1 - 1 - -
Other - - - 1 1 -  
Acinetobacter variabilis NDM - - 1 - - -
Pseudomonas              
Pseudomonas aeruginosa IMP - 1 - - - -
NDM 3 - - - - -  
VIM 1 - - 2 2 -  
Other 9 4 1 4 3 -  
Pseudomonas putida group VIM 1 - - - - -
Other - - 1 - - -  
Other pseudomonas spp VIM - - - 1 - -
Other - 1 1 - - -  
Other              
  KPC - 1 - 1 1 -
NDM - - - 1 - -  
OXA48 - - 1 - - -  
Other 1 - - - - -