Research and analysis

NOIDs causative agents: week 3 (week ending 18 January 2026)

Updated 20 January 2026

The list of causative agents that laboratories must notify the UK Health Security Agency (UKHSA) about has been expanded to include additional notifiable organisms. These became reportable under the Health Protection (Notification) (Amendment) Regulations from 6 April 2025.

Publication of the additional causative agents will begin at a later date, once reporting development work has been undertaken to include them.

This report contains statistics of formal notifications of causative agent test results to UKHSA from diagnostic laboratories in England, under Regulation 4 of the Health Protection (Notifications) Regulations 2010.

The number of notifications in this report reflects test results provided from laboratories to UKHSA before UKHSA interprets or applies standardised case definitions to these test results. Individual test results will not always result in a confirmed diagnosis of a disease, therefore the notifications in this report should not be considered counts of cases and should be interpreted with caution.

Epidemiology reports including confirmed case numbers using standardised case definitions are published separately on a per pathogen or pathogen-group basis.

Laboratories in England have a statutory duty to notify UKHSA of the identification of the following causative agents:

  • Bacillus anthracis
  • Bacillus cereus
  • Bordetella pertussis
  • Borrelia spp
  • Brucella spp
  • Burkholderia mallei
  • Burkholderia pseudomallei
  • Campylobacter spp
  • Carbapenemase-producing Gram-negative bacteria
  • Chikungunya virus
  • Chlamydophila psittaci
  • Clostridium botulinum
  • Clostridium perfringens
  • Clostridium tetani
  • Corynebacterium diphtheriae
  • Corynebacterium ulcerans
  • Coxiella burnetii
  • Crimean-Congo haemorrhagic fever virus
  • Cryptosporidium spp
  • Dengue virus
  • Ebola virus
  • Entamoeba histolytica
  • Escherichia coli O 157
  • Francisella tularensis
  • Giardia spp
  • Guanarito virus
  • Haemophilus influenzae (invasive)
  • Hanta virus
  • hepatitis A
  • hepatitis B
  • hepatitis C
  • hepatitis D
  • hepatitis E
  • influenza virus
  • Junin virus
  • Kyasanur Forest disease virus
  • Lassa virus
  • Legionella spp
  • Leptospira interrogans
  • Listeria monocytogenes
  • Machupo virus
  • Marburg virus
  • measles virus
  • mpox virus
  • mumps virus
  • Mycobacterium tuberculosis complex
  • Neisseria meningitidis
  • Omsk haemorrhagic fever virus
  • Plasmodium falciparum
  • Plasmodium Knowlesi
  • Plasmodium Malariae
  • Plasmodium Ovale
  • Plasmodium Vivax
  • polio virus
  • Rabies virus
  • Rickettsia spp
  • Rift Valley fever virus
  • Rubella virus
  • Sabia virus
  • Salmonella spp
  • SARS coronavirus
  • Shigella spp
  • Streptococcus group A (invasive)
  • Streptococcus pneumoniae (invasive)
  • Varicella zoster virus
  • Variola virus
  • Vibrio cholerae
  • West Nile virus
  • Yellow fever virus
  • Yersinia pestis

Statutory notifications of causative agents, grouped by root organism

Totals for the current week compared to the previous 5.

Week notification received 2025/50 2025/51 2025/52 2026/01 2026/02 2026/03
Arboviruses            
West Nile Virus - 1 1 - - 1
Bacillus            
Bacillus cereus 21 15 17 13 12 19
Bordetella            
Bordetella pertussis 4 2 2 2 3 5
Borrelia            
Borrelia burgdorferi 32 27 19 28 20 17
Borrelia sp 4 4 8 6 3 3
Brucella            
Brucella sp 2 3 1 - 3 -
Burkholderia            
Burkholderia mallei - - 1 - - -
Burkholderia pseudomallei - - - - 1 -
Campylobacter            
Campylobacter coli 17 21 13 12 16 20
Campylobacter fetus - - 1 - - -
Campylobacter jejuni 296 284 241 169 196 223
Campylobacter other named 2 - 3 2 1 3
Campylobacter sp 896 850 640 621 730 830
Campylobacter upsaliensis - 1 1 1 - 4
Campylobacter ureolyticus (bacteroides corrodens) 1 1 1 - 2 1
Chikungunya virus            
Chikungunya virus 2 2 - 1 1 2
Clostridium            
Clostridium perfringens 32 31 51 34 51 51
Coronavirus            
Coronavirus 77 95 97 114 152 167
Human coronavirus 229e 5 - 2 3 4 10
Human coronavirus hku1 1 - - 1 2 1
Human coronavirus nl63 3 - 1 2 - 2
Human coronavirus oc43 2 1 5 3 10 8
SARS-CoV-2 antibody void - - 2 2 - -
SARS-CoV-2 coronavirus (COVID-19) 1,353 625 547 652 670 717
SARS-CoV-2 coronavirus (COVID-19) indeterminate 50 35 10 14 27 27
SARS-CoV-2 IgG antibody negative 10 7 4 4 - -
SARS-CoV-2 IgG antibody positive 77 38 26 24 28 22
SARS-CoV-2 total antibody negative - - 12 12 8 16
SARS-CoV-2 total antibody positive 19 7 43 15 44 34
Corynebacterium            
Corynebacterium diphtheriae 6 5 4 3 3 2
Corynebacterium ulcerans 1 1 - - - -
Coxiella            
Coxiella burnetii 1 - - - - -
Cryptosporidium            
Cryptosporidium cuniculus 2 - - - - -
Cryptosporidium hominis 10 11 6 4 9 4
Cryptosporidium parvum 37 35 29 17 11 3
Cryptosporidium sp 32 24 14 15 25 31
Cryptosporidium ubiquitum 2 2 2 - 1 -
Entamoeba            
Entamoeba histolytica 4 4 3 2 1 7
Escherichia            
Escherichia coli O 157 4 6 3 3 5 5
Flaviviruses            
Dengue virus 3 3 4 1 6 3
Giardia            
Giardia intestinalis - 2 2 - - 1
Giardia sp 124 148 84 84 112 128
Haemophilus            
Haemophilus influenzae 62 71 54 62 62 63
Hepatitis viruses            
Hepatitis A 14 12 12 3 14 13
Hepatitis B 264 274 172 223 198 229
Hepatitis C 236 601 160 190 216 188
Hepatitis D 5 4 2 4 4 3
Hepatitis E 34 30 25 26 32 38
Influenza virus            
Influenza A 9,540 7,877 6,043 6,060 5,522 4,199
Influenza B 71 51 47 56 50 57
Influenza indeterminate 18 7 23 38 15 30
Influenza ungrouped 218 321 228 141 112 75
Legionella            
Legionella pneumophila 7 12 3 2 7 8
Legionella sp 6 3 - 5 4 5
Listeria            
Listeria monocytogenes 7 2 6 4 2 2
Mycobacterium            
Mycobacterium tuberculosis 91 110 76 75 77 88
Neisseria            
Neisseria meningitidis 40 25 28 26 37 38
Orthopoxvirus            
Mpox virus positive 6 8 2 4 6 12
Paramyxoviruses            
Measles virus 11 9 7 8 8 15
Mumps virus 9 5 3 3 2 6
Plasmodium            
Plasmodium falciparum - - - 1 - 1
Plasmodium ovale - - - - - 2
Polyomavirus            
Polyomavirus BK 75 79 53 40 65 75
Polyomavirus JC 18 7 15 8 10 12
Polyomavirus untyped 13 14 9 8 8 20
Rickettsia            
Rickettsia spotted fever - 1 1 - - -
Rickettsia tsutsugamushi 1 - 1 - 1 -
Rubella virus            
Rubella virus 1 2 1 2 5 2
Salmonella            
Other salmonellas 58 48 38 42 31 24
Salmonella bareilly 8 - - - - -
Salmonella enterica - 5 - - - -
Salmonella enteritidis 45 44 31 33 19 10
Salmonella infantis - - 5 - - -
Salmonella newport - 8 - - - -
Salmonella sp 28 36 16 12 79 134
Salmonella typhi and paratyphi 12 7 5 9 14 11
Salmonella typhimurium 29 21 24 15 10 8
Salmonella virchow - 5 - - - -
Shigella            
Shigella boydii 1 1 2 1 1 -
Shigella dysenteriae 1 - - 1 - 1
Shigella flexneri 28 12 11 18 15 15
Shigella sonnei 26 42 14 17 21 12
Shigella sp 41 35 33 28 50 60
Streptococcus            
Streptococcus group A 55 51 57 62 70 55
Streptococcus pneumoniae 146 194 166 228 196 138
Vibrio            
Vibrio cholerae - - - - 1 -

Carbapenemase-producing Enterobacterales (CPE)

For all Carbapenemase-producing Gram-negative organisms, the reports are de-duplicated by first mention of organism species and resistance mechanism by person in a rolling 52-week period.

Note: the numbers presented here do not include specimens that have been referred to the Antimicrobial Resistance and Healthcare Associated Infections (AMRHAI).

Week notification received 2025/50 2025/51 2025/52 2026/01 2026/02 2026/03
Citrobacter              
Citrobacter spp KPC 1 - 1 - - 3
  NDM 2 2 1 2 - -
  OXA48 2 1 3 2 1 2
  Other 1 - 1 - - -
Enterobacter              
Enterobacter cloacae complex IMP 3 2 3 3 3 2
  KPC 3 4 3 2 2 -
  NDM 4 15 7 3 10 3
  OXA48 6 4 11 4 6 -
  VIM - 1 1 - 1 -
  Other - 2 1 1 3 -
Other enterobacter spp KPC - 2 - - - -
  NDM - 1 - - - -
Escherichia              
Escherichia coli IMP - - - 1 1 -
  KPC 3 3 3 7 6 -
  NDM 15 17 17 15 17 6
  OXA48 22 23 17 24 14 6
  VIM - - - 2 - -
  Other 1 1 2 4 2 1
Escherichia marmotae NDM - 1 - - - -
  Other - 1 - - - -
Klebsiella              
Klebsiella aerogenes NDM - 1 - - - -
  OXA48 - 1 1 - - -
  Other - - 1 - - -
Klebsiella oxytoca IMP - - 1 - - -
  KPC 3 1 - - - -
  NDM - - - 1 - 1
  OXA48 1 - - - 1 1
  VIM - 1 - - - -
Klebsiella pneumoniae IMP 2 - - - - -
  KPC 5 3 6 4 6 1
  NDM 6 11 10 17 9 5
  OXA48 15 13 6 13 8 4
  VIM 1 - - 1 1 2
  Other 2 2 - 1 1 1
Klebsiella pneumoniae subsp ozenae KPC - - 2 - 1 -
Klebsiella variicola OXA48 - - 1 - - -
Morganella              
Morganella morganii NDM - - - 2 - -
  OXA48 - - 1 - - -
Pantoea              
Pantoea septica OXA48 - - 1 - - -
Proteus              
Proteus mirabilis NDM 2 - 1 1 2 -
  Other 1 - - 2 2 -
Providencia              
Providencia stuartii OXA48 - - - - 1 -
Raoultella              
Raoultella ornithinolytica OXA48 1 - - - - -
  Other 1 - - - - -
Other raoultella spp OXA48 - - - 1 - -
Serratia              
Serratia marcescens/ureilytica NDM - 1 - - - -
  OXA48 - 1 - - - -

Other carbapenemase-producing Gram-negative organisms

For all Carbapenemase-producing Gram-negative organisms, the reports are de-duplicated by first mention of organism species and resistance mechanism by person in a rolling 52-week period.

Note: the numbers presented here do not include specimens that have been referred to.

Week notification received 2025/50 2025/51 2025/52 2026/01 2026/02 2026/03
Acinetobacter              
Acinetobacter baumannii NDM - 1 - - 1 -
  Other - 1 - - 1 -
Pseudomonas              
Pseudomonas aeruginosa IMP 1 - - - - -
  NDM - 1 1 1 1 1
  VIM - 1 - 2 1 -
  Other 3 1 2 2 3 1
Pseudomonas alcaligenes VIM - - 1 - - -
Other              
  KPC - - 1 - - -
  NDM - 1 - 1 1 -
  OXA48 - 1 - 1 - -