Research and analysis

NOIDs causative agents: week 27 (week ending 7 July 2025)

Updated 15 July 2025

The list of causative agents that laboratories must notify the UK Health Security Agency (UKHSA) about has been expanded to include additional  notifiable organisms which became reportable under the Health Protection (Notification) (Amendment) Regulations from 6 April 2025.

Publication of the additional causative agents will begin at a later date, once reporting development work has been undertaken to include them.

Laboratories in England have a statutory duty to notify UKHSA of the identification of the following causative agents:

  • Bacillus anthracis
  • Bacillus cereus
  • Bordetella pertussis
  • Borrelia spp
  • Brucella spp
  • Burkholderia mallei
  • Burkholderia pseudomallei
  • Campylobacter spp
  • Carbapenemase-producing Gram-negative bacteria
  • Chikungunya virus
  • Chlamydophila psittaci
  • Clostridium botulinum
  • Clostridium perfringens
  • Clostridium tetani
  • Corynebacterium diphtheriae
  • Corynebacterium ulcerans
  • Coxiella burnetii
  • Crimean-Congo haemorrhagic fever virus
  • Cryptosporidium spp
  • Dengue virus
  • Ebola virus
  • Entamoeba histolytica
  • Escherichia coli O 157
  • Francisella tularensis
  • Giardia spp
  • Guanarito virus
  • Haemophilus influenzae (invasive)
  • Hanta virus
  • hepatitis A
  • hepatitis B
  • hepatitis C
  • hepatitis D
  • hepatitis E
  • influenza virus
  • Junin virus
  • Kyasanur Forest disease virus
  • Lassa virus
  • Legionella spp
  • Leptospira interrogans
  • Listeria monocytogenes
  • Machupo virus
  • Marburg virus
  • measles virus
  • mpox virus
  • mumps virus
  • Mycobacterium tuberculosis complex
  • Neisseria meningitidis
  • Omsk haemorrhagic fever virus
  • Plasmodium falciparum
  • Plasmodium Knowlesi
  • Plasmodium Malariae
  • Plasmodium Ovale
  • Plasmodium Vivax
  • polio virus
  • Rabies virus
  • Rickettsia spp
  • Rift Valley fever virus
  • Rubella virus
  • Sabia virus
  • Salmonella spp
  • SARS coronavirus
  • Shigella spp
  • Streptococcus group A (invasive)
  • Streptococcus pneumoniae (invasive)
  • Varicella zoster virus
  • Variola virus
  • Vibrio cholerae
  • West Nile virus
  • Yellow fever virus
  • Yersinia pestis

Statutory notifications of causative agents, grouped by root organism

Totals for the current week compared to the previous 5.

Week notification received 2025/22 2025/23 2025/24 2025/25 2025/26 2025/27
Bacillus            
Bacillus cereus 23 26 15 23 36 41
Bordetella            
Bordetella pertussis 9 7 5 9 7 11
Borrelia            
Borrelia burgdorferi 18 20 31 34 39 48
Borrelia sp 5 1 - 2 5 6
Brucella            
Brucella melitensis - 1 - - - -
Brucella sp 2 - - - - -
Campylobacter            
Campylobacter coli 57 52 48 46 39 39
Campylobacter curvus 1 - - - - -
Campylobacter jejuni 321 349 353 360 320 291
Campylobacter lari 1 - 2 - - -
Campylobacter other named 2 3 1 4 2 1
Campylobacter sp 1,159 1,301 1,259 1,165 1,147 1,140
Campylobacter upsaliensis 1 3 1 1 1 -
Campylobacter ureolyticus (bacteroides corrodens) - - 4 2 - -
Chikungunya virus            
Chikungunya virus - 3 - 2 - 1
Clostridium            
Clostridium perfringens 29 47 45 30 42 33
Coronavirus            
Coronavirus 66 44 40 32 29 19
Human coronavirus 229e 2 2 - 2 - -
Human coronavirus oc43 - 2 1 1 - 1
SARS-CoV-2 antibody void 26 12 26 40 24 36
SARS-CoV-2 coronavirus (COVID-19) 1,193 1,218 1,291 1,329 1,042 929
SARS-CoV-2 coronavirus (COVID-19) indeterminate 27 22 58 56 32 30
SARS-CoV-2 IgG antibody negative 41 32 25 19 27 20
SARS-CoV-2 IgG antibody positive 104 86 70 78 86 70
SARS-CoV-2 total antibody negative - - 4 4 13 8
SARS-CoV-2 total antibody positive 4 15 27 9 26 36
Corynebacterium            
Corynebacterium diphtheriae 7 1 - 2 7 4
Corynebacterium ulcerans - 1 10 3 1 -
Coxiella            
Coxiella burnetii - 1 - - 1 1
Cryptosporidium            
Cryptosporidium cuniculus - - - 1 - -
Cryptosporidium hominis 7 8 12 14 12 1
Cryptosporidium meleagridis - - - 1 - -
Cryptosporidium parvum 24 28 31 26 24 7
Cryptosporidium sp 25 29 31 34 35 53
Entamoeba            
Entamoeba histolytica 4 4 4 5 1 3
Escherichia            
Escherichia coli O 157 6 16 10 21 11 9
Flaviviruses            
Dengue virus 6 6 1 9 6 3
Giardia            
Giardia intestinalis - 1 - - - -
Giardia sp 82 104 91 114 109 98
Haemophilus            
Haemophilus influenzae 65 73 69 46 58 63
Hepatitis viruses            
Hepatitis A 15 18 29 36 18 20
Hepatitis B 253 263 243 306 316 285
Hepatitis C 258 282 288 241 286 249
Hepatitis D 4 9 7 10 9 6
Hepatitis E 40 29 40 47 32 24
Influenza virus            
Influenza A 238 148 265 188 200 155
Influenza B 60 19 18 27 21 17
Influenza indeterminate 1 - 1 3 - -
Influenza ungrouped 11 2 5 2 - 1
Legionella            
Legionella longbeachae - 1 1 - - 1
Legionella pneumophila 9 7 9 7 8 5
Legionella sp 5 4 1 7 2 -
Listeria            
Listeria monocytogenes 8 4 12 3 5 6
Mycobacterium            
Mycobacterium tuberculosis 100 88 120 114 98 73
Neisseria            
Neisseria meningitidis 23 28 24 16 19 31
Orthopoxvirus            
Mpox virus positive 7 10 2 10 5 4
Paramyxoviruses            
Measles virus 27 27 28 24 27 28
Mumps virus 3 6 12 6 9 5
Plasmodium            
Plasmodium falciparum - 4 - - - 1
Plasmodium malariae - 1 - - 1 -
Polyomavirus            
Polyomavirus BK 49 41 51 66 27 56
Polyomavirus JC 10 12 16 10 14 13
Polyomavirus untyped 7 21 6 11 23 10
Rickettsia            
Rickettsia prowazekii - - - 1 - -
Rickettsia spotted fever - - - 1 2 1
Rubella virus            
Rubella virus 2 1 2 1 1 7
Salmonella            
Other salmonellas 54 70 69 62 57 27
Salmonella agona - 6 - - - -
Salmonella bareilly - - - 5 - -
Salmonella chester 5 - 5 - - -
Salmonella enteritidis 63 64 70 58 57 16
Salmonella infantis - 6 11 5 5 -
Salmonella java - - 6 5 - -
Salmonella newport - 5 - 6 - -
Salmonella saint-paul - - 5 6 - -
Salmonella sp 20 23 25 38 115 220
Salmonella typhi and paratyphi 23 24 13 12 10 12
Salmonella typhimurium 30 31 36 36 19 15
Shigella            
Shigella boydii 1 1 - 1 2 -
Shigella dysenteriae - 1 - 2 - -
Shigella flexneri 18 17 15 14 13 12
Shigella sonnei 16 11 11 10 8 12
Shigella sp 52 58 49 54 46 84
Streptococcus            
Streptococcus group A 58 76 47 68 63 55
Streptococcus pneumoniae 142 118 106 85 101 73
Vibrio            
Vibrio cholerae - 2 2 - 1 2

Carbapenemase-producing Enterobacterales (CPE)

For all Carbapenemase-producing Gram-negative organisms, the reports are de-duplicated by first mention of organism species and resistance mechanism by person in a rolling 52-week period.

Note: the numbers presented here do not include specimens that have been referred to the Antimicrobial Resistance and Healthcare Associated Infections (AMRHAI) Reference Unit.

Week notification received 2025/22 2025/23 2025/24 2025/25 2025/26 2025/27
Citrobacter              
Citrobacter spp IMP 1 1 2 2 - 1
  KPC 2 3 1 2 3 -
  NDM 2 2 1 - 1 -
  OXA48 1 2 - 4 2 1
  VIM - - - 1 - -
  Other - 1 1 1 - -
Enterobacter              
Enterobacter cloacae complex IMP 3 2 5 1 2 -
  KPC 3 3 7 9 7 1
  NDM 8 5 8 17 7 2
  OXA48 2 1 6 3 6 -
  Other 1 1 1 - 2 1
Other enterobacter spp NDM - 1 - - - -
Escherichia              
Escherichia coli IMP 3 1 1 1 - -
  KPC 2 - 1 5 1 -
  NDM 28 17 23 31 19 4
  OXA48 13 24 27 23 16 7
  VIM - - 1 - - -
  Other 1 1 2 1 1 1
Other escherichia spp NDM - 1 - - - -
  OXA48 - 1 - - - -
Klebsiella              
Klebsiella aerogenes KPC - - - - 1 -
  NDM 1 - - - - -
  OXA48 - - - - 1 -
Klebsiella oxytoca KPC - 1 2 - - 1
  NDM 2 - 1 - - -
  OXA48 - 1 - 1 - -
  VIM - 1 - - - 1
  Other - 1 1 - - -
Klebsiella pneumoniae IMP - 2 3 1 - -
  KPC 5 8 12 9 8 1
  NDM 14 6 8 11 6 1
  OXA48 7 9 8 14 14 1
  VIM 1 1 1 1 - -
  Other 6 2 1 1 1 -
Klebsiella pneumoniae subsp ozenae NDM - - - - 1 -
Klebsiella variicola KPC 1 - - - - -
  NDM 2 - - - - -
Other klebsiella spp KPC - 1 - - - -
  NDM - - - 1 - -
  OXA48 1 - - 1 - -
Leclercia              
Leclercia adecarboxylata OXA48 - - - - 1 -
Morganella              
Morganella morganii Other - 1 - - - -
Pantoea              
Pantoea septica KPC - 1 - - - -
Proteus              
Proteus mirabilis KPC 1 - - - - -
  NDM 1 1 1 - - -
  Other 1 2 - - 1 -
Raoultella              
Raoultella spp OXA48 - - - 1 - -
Serratia              
Serratia marcescens/ureilytica KPC - - - 1 1 -
  NDM 1 - - - - -

Other carbapenemase-producing Gram-negative organisms

For all Carbapenemase-producing Gram-negative organisms, the reports are de-duplicated by first mention of organism species and resistance mechanism by person in a rolling 52-week period.

Note: the numbers presented here do not include specimens that have been referred to.

Week notification received 2025/22 2025/23 2025/24 2025/25 2025/26 2025/27
Acinetobacter              
Acinetobacter baumannii NDM - 1 2 1 - -
Acinetobacter pittii NDM 1 - - - - -
Other acinetobacter spp NDM - - - - 1 -
Pseudomonas              
Pseudomonas aeruginosa IMP - - - 1 1 -
  NDM 1 1 1 2 - -
  VIM - - 1 - - -
  Other 1 1 1 2 2 -
Pseudomonas nitroreducens VIM - - - 1 - -
Pseudomonas putida group VIM - - - - - 1
Pseudomonas stutzeri group Other 1 - - - - -
Other pseudomonas spp NDM - 1 - - - -
Other              
  OXA48 - - - - - 1