Research and analysis

NOIDs causative agents: week 21 (week ending 25 May 2025)

Updated 27 May 2025

The list of causative agents that laboratories must notify the UK Health Security Agency (UKHSA) about has been expanded to include additional  notifiable organisms which became reportable under the Health Protection (Notification) (Amendment) Regulations from 6 April 2025. Publication of the additional causative agents will begin at a later date, once reporting development work has been undertaken to include them.

Laboratories in England have a statutory duty to notify the UK Health Security Agency (UKHSA) of the identification of the following causative agents:

  • Bacillus anthracis
  • Bacillus cereus
  • Bordetella pertussis
  • Borrelia spp
  • Brucella spp
  • Burkholderia mallei
  • Burkholderia pseudomallei
  • Campylobacter spp
  • Carbapenemase-producing Gram-negative bacteria
  • Chikungunya virus
  • Chlamydophila psittaci
  • Clostridium botulinum
  • Clostridium perfringens
  • Clostridium tetani
  • Corynebacterium diphtheriae
  • Corynebacterium ulcerans
  • Coxiella burnetii
  • Crimean-Congo haemorrhagic fever virus
  • Cryptosporidium spp
  • Dengue virus
  • Ebola virus
  • Entamoeba histolytica
  • Escherichia coli O 157
  • Francisella tularensis
  • Giardia spp
  • Guanarito virus
  • Haemophilus influenzae (invasive)
  • Hanta virus
  • hepatitis A
  • hepatitis B
  • hepatitis C
  • hepatitis D
  • hepatitis E
  • influenza virus
  • Junin virus
  • Kyasanur Forest disease virus
  • Lassa virus
  • Legionella spp
  • Leptospira interrogans
  • Listeria monocytogenes
  • Machupo virus
  • Marburg virus
  • measles virus
  • mpox virus
  • mumps virus
  • Mycobacterium tuberculosis complex
  • Neisseria meningitidis
  • Omsk haemorrhagic fever virus
  • Plasmodium falciparum
  • Plasmodium Knowlesi
  • Plasmodium Malariae
  • Plasmodium Ovale
  • Plasmodium Vivax
  • polio virus
  • Rabies virus
  • Rickettsia spp
  • Rift Valley fever virus
  • Rubella virus
  • Sabia virus
  • Salmonella spp
  • SARS coronavirus
  • Shigella spp
  • Streptococcus group A (invasive)
  • Streptococcus pneumoniae (invasive)
  • Varicella zoster virus
  • Variola virus
  • Vibrio cholerae
  • West Nile virus
  • Yellow fever virus
  • Yersinia pestis

Statutory Notifications of causative agents, grouped by root organism

Totals for the current week compared to the previous 5.

Week notification received 2025/17 2025/18 2025/19 2025/20 2025/21
Arboviruses          
West Nile Virus 1 - - - -
Bacillus          
Bacillus cereus 18 21 28 28 29
Bordetella          
Bordetella pertussis 4 13 7 5 3
Borrelia          
Borrelia burgdorferi 17 12 16 34 21
Borrelia sp 4 2 4 1 3
Brucella          
Brucella sp 3 1 - 1 -
Campylobacter          
Campylobacter coli 19 30 31 36 35
Campylobacter fetus - 1 1 2 1
Campylobacter hyointestinalis - - 1 - -
Campylobacter jejuni 244 342 273 366 347
Campylobacter lari - - - - 1
Campylobacter other named 1 - 3 - 3
Campylobacter rectus - 1 - - -
Campylobacter sp 880 1,117 886 1,208 1,304
Campylobacter upsaliensis - - - 3 1
Campylobacter ureolyticus (bacteroides corrodens) - 1 1 1 1
Chikungunya virus          
Chikungunya virus - 1 2 - 3
Clostridium          
Clostridium perfringens 46 35 41 37 37
Coronavirus          
Coronavirus 87 72 61 53 49
Human coronavirus 229e 3 1 - 1 2
SARS-CoV-2 antibody void 26 20 14 12 28
SARS-CoV-2 coronavirus (COVID-19) 1,231 1,221 958 1,124 1,042
SARS-CoV-2 coronavirus (COVID-19) indeterminate 65 48 63 51 36
SARS-CoV-2 IgG antibody negative 32 21 15 11 18
SARS-CoV-2 IgG antibody positive 86 117 77 71 62
SARS-CoV-2 total antibody negative 4 8 8 - -
SARS-CoV-2 total antibody positive 20 44 13 22 19
Corynebacterium          
Corynebacterium diphtheriae 3 2 3 4 2
Corynebacterium ulcerans - 1 1 - -
Coxiella          
Coxiella burnetii - 1 - 2 -
Cryptosporidium          
Cryptosporidium hominis 3 13 9 14 7
Cryptosporidium parvum 65 98 68 72 10
Cryptosporidium sp 45 80 40 66 57
Cryptosporidium ubiquitum - - 1 - -
Entamoeba          
Entamoeba histolytica 4 3 6 7 5
Escherichia          
Escherichia coli O 157 11 12 6 10 8
Flaviviruses          
Dengue virus 2 11 6 2 6
Giardia          
Giardia sp 93 119 78 148 102
Haemophilus          
Haemophilus influenzae 65 78 64 74 56
Hepatitis viruses          
Hepatitis A 19 13 17 17 15
Hepatitis B 309 277 258 296 305
Hepatitis C 267 292 212 324 276
Hepatitis D 3 7 6 3 8
Hepatitis E 36 35 39 43 33
Influenza virus          
Influenza A 649 497 352 313 270
Influenza B 308 191 104 71 58
Influenza indeterminate 8 - - 4 3
Influenza ungrouped 28 17 5 10 13
Legionella          
Legionella longbeachae - - - 1 -
Legionella pneumophila 7 2 5 9 9
Legionella sp 5 1 2 6 3
Listeria          
Listeria monocytogenes 2 4 3 6 10
Mycobacterium          
Mycobacterium tuberculosis 91 103 75 89 88
Neisseria          
Neisseria meningitidis 23 29 24 26 34
Orthopoxvirus          
Mpox virus positive 5 13 8 7 1
Paramyxoviruses          
Measles virus 20 12 28 27 23
Mumps virus 3 3 9 8 5
Plasmodium          
Plasmodium falciparum - - - 11 -
Plasmodium malariae - - - 1 -
Plasmodium ovale - - - 1 -
Plasmodium vivax - - - 1 -
Polyomavirus          
Polyomavirus BK 46 46 42 50 63
Polyomavirus JC 8 6 10 13 15
Polyomavirus untyped 8 26 9 15 20
Rickettsia          
Rickettsia prowazekii 1 - - - 1
Rickettsia spotted fever - - - - 1
Rickettsia tsutsugamushi - 1 - - -
Rubella virus          
Rubella virus - 5 3 1 3
Salmonella          
Other salmonellas 67 66 53 48 22
Salmonella agona 7 - - - -
Salmonella enteritidis 47 65 44 29 12
Salmonella infantis 5 - - - -
Salmonella java - 5 - - -
Salmonella newport - 8 - - -
Salmonella saint-paul 5 7 - - -
Salmonella sp 17 41 42 102 154
Salmonella stanley - 8 - - -
Salmonella typhi and paratyphi 14 27 16 18 18
Salmonella typhimurium 23 19 30 16 9
Slmonella enterica - 6 - 6 -
Shigella          
Shigella boydii 1 3 - 1 1
Shigella dysenteriae 1 3 - - -
Shigella flexneri 15 18 21 17 6
Shigella sonnei 14 22 16 9 14
Shigella sp 45 81 61 84 66
Streptococcus          
Streptococcus group A 49 60 53 66 58
Streptococcus pneumoniae 163 128 95 128 116
Vibrio          
Vibrio cholerae 1 1 2 2 1

Carbapenemase-producing Enterobacterales (CPE)

For all Carbapenemase-producing Gram-negative organisms, the reports are de-duplicated by first mention of organism species and resistance mechanism by person in a rolling 52-week period.

Note: the numbers presented here do not include specimens that have been referred to the AMRHAI Reference Unit.

Week notification received 2025/17 2025/18 2025/19 2025/20 2025/21
Citrobacter            
Citrobacter spp IMP - - 1 - -
  NDM 1 - 2 2 1
  OXA48 2 2 1 5 -
Enterobacter            
Enterobacter cloacae complex IMP 1 1 3 2 -
  KPC 5 5 5 3 2
  NDM 3 4 8 8 1
  OXA48 4 5 4 4 1
  VIM - - - 1 -
  Other 1 2 1 - -
Other enterobacter spp NDM - 1 - - -
  OXA48 - 1 - - -
Escherichia            
Escherichia coli IMP - - - - 1
  KPC - 1 5 2 -
  NDM 19 22 23 18 6
  OXA48 19 22 17 26 6
  VIM - - 1 2 -
  Other 1 1 - 5 2
Hafnia            
Hafnia alvei KPC - - 1 - -
Klebsiella            
Klebsiella aerogenes OXA48 - - - 1 -
Klebsiella oxytoca KPC - 2 - - -
  NDM - 1 - - 1
  OXA48 1 - 2 - 1
Klebsiella pneumoniae IMP 1 1 1 - -
  KPC 6 4 3 4 -
  NDM 12 14 11 9 1
  OXA48 10 14 18 14 4
  Other 2 4 1 5 2
Klebsiella variicola KPC - - - 1 -
Proteus            
Proteus mirabilis NDM 2 1 2 3 -
  Other 1 2 1 2 -
Other proteus spp NDM - 2 - - -
Raoultella            
Raoultella spp KPC 1 - - - -
  VIM 1 - - - -
Serratia            
Serratia marcescens/ureilytica NDM - - 1 - -

Other carbapenemase-producing Gram-negative organisms

For all Carbapenemase-producing Gram-negative organisms, the reports are de-duplicated by first mention of organism species and resistance mechanism by person in a rolling 52-week period.

Note: the numbers presented here do not include specimens that have been referred to.

Week notification received 2025/17 2025/18 2025/19 2025/20 2025/21
Citrobacter            
Citrobacter spp IMP - - 1 - -
  NDM 1 - 2 2 1
  OXA48 2 2 1 5 -
Enterobacter            
Enterobacter cloacae complex IMP 1 1 3 2 -
  KPC 5 5 5 3 2
  NDM 3 4 8 8 1
  OXA48 4 5 4 4 1
  VIM - - - 1 -
  Other 1 2 1 - -
Other enterobacter spp NDM - 1 - - -
  OXA48 - 1 - - -
Escherichia            
Escherichia coli IMP - - - - 1
  KPC - 1 5 2 -
  NDM 19 22 23 18 6
  OXA48 19 22 17 26 6
  VIM - - 1 2 -
  Other 1 1 - 5 2
Hafnia            
Hafnia alvei KPC - - 1 - -
Klebsiella            
Klebsiella aerogenes OXA48 - - - 1 -
Klebsiella oxytoca KPC - 2 - - -
  NDM - 1 - - 1
  OXA48 1 - 2 - 1
Klebsiella pneumoniae IMP 1 1 1 - -
  KPC 6 4 3 4 -
  NDM 12 14 11 9 1
  OXA48 10 14 18 14 4
  Other 2 4 1 5 2
Klebsiella variicola KPC - - - 1 -
Proteus            
Proteus mirabilis NDM 2 1 2 3 -
  Other 1 2 1 2 -
Other proteus spp NDM - 2 - - -
Raoultella            
Raoultella spp KPC 1 - - - -
  VIM 1 - - - -
Serratia            
Serratia marcescens/ureilytica NDM - - 1 - -